SeuratLSIClustering-redeemR-method: SeuratLSIClustering This will use the mito variants for...

In chenweng1991/scMitoTracing: R package for Regulatory multi-omics with Deep Mitochondrial mutation profiling

SeuratLSIClustering This will use the mito variants for Seurat clustering (LSI based)

Description

SeuratLSIClustering This will use the mito variants for Seurat clustering (LSI based)

Usage

## S4 method for signature 'redeemR'
SeuratLSIClustering(
  object,
  binary = T,
  res = 0.6,
  lsidim = 2:50,
  rmvariants = c("Variants310TC", "Variants3109TC", "Variants5764CT")
)

Arguments

binary	Default is tree, to make use of the binary matrix
res	Default os 0.3, the resolution of the clustering
redeemR	class

Value

redeemR class

chenweng1991/scMitoTracing documentation built on July 2, 2024, 8:41 p.m.