reconstruct_genotype_summary: This is a function borrowed from...

In chenweng1991/scMitoTracing: R package for Regulatory multi-omics with Deep Mitochondrial mutation profiling

This is a function borrowed from https://github.com/NickWilliamsSanger/treemut/blob/main/R/treemut.R#L68 Input phylo object, return a "profile matrix"–Edge(or denoted as the ending node) vs cell. a 0, 1 character string that indicate what cells in a given node

Description

This is a function borrowed from https://github.com/NickWilliamsSanger/treemut/blob/main/R/treemut.R#L68 Input phylo object, return a "profile matrix"–Edge(or denoted as the ending node) vs cell. a 0, 1 character string that indicate what cells in a given node

Usage

reconstruct_genotype_summary(phylo)

Arguments

phylo

phylo an ape object

Value

df includes df$df which is a big data frame, and df$sample that is the cell names

chenweng1991/scMitoTracing documentation built on July 2, 2024, 8:41 p.m.