Man pages for chr1swallace/snpBMA
BMA exploration of multi-SNP models in genetic association testing
| bma.expand | bma.expand |
| bma.grow | bma.grow |
| collate.bma | Collate a list of glib output |
| impute.missing | Fill in missing values in SnpMatrix object |
| index.groups | index.groups |
| logdiff | logdiff (copied from coloc package) |
| logsum | logsum (copied from coloc package) |
| make.data | make.data |
| max.models | max.models |
| mcomp.detail | mcomp.detail |
| model.names | model.names |
| models.group.collapse | models.group.collapse |
| models-methods | models |
| null.model | null.model |
| post.snpBMA | Internal, post.snpBMA |
| prior.betabinomial | prior.betabinomial |
| prior.binomial | prior.binomial |
| r2.groups | create groups of SNPs with LD > r2.threshold with index.snps |
| show.ld | show.ld |
| show-methods | show-methods |
| snps.prune.data | mcomp |
| snps.prune-methods | snps.prune |
| snps.prune.models | mcomp |
| snp.summary | Summary Bayes Factors for each SNP |
| stack-methods | stack-methods |
| tag | tag |
| top.models-methods | top.models |
| top.snpBMA | snpBMA |
| top.snpBMAlist | top.snpBMAlist |
| top.snps | top.snps |
