Man pages for chr1swallace/snpBMA
BMA exploration of multi-SNP models in genetic association testing

bma.expandbma.expand
bma.growbma.grow
collate.bmaCollate a list of glib output
impute.missingFill in missing values in SnpMatrix object
index.groupsindex.groups
logdifflogdiff (copied from coloc package)
logsumlogsum (copied from coloc package)
make.datamake.data
max.modelsmax.models
mcomp.detailmcomp.detail
model.namesmodel.names
models.group.collapsemodels.group.collapse
models-methodsmodels
null.modelnull.model
post.snpBMAInternal, post.snpBMA
prior.betabinomialprior.betabinomial
prior.binomialprior.binomial
r2.groupscreate groups of SNPs with LD > r2.threshold with index.snps
show.ldshow.ld
show-methodsshow-methods
snps.prune.datamcomp
snps.prune-methodssnps.prune
snps.prune.modelsmcomp
snp.summarySummary Bayes Factors for each SNP
stack-methodsstack-methods
tagtag
top.models-methodstop.models
top.snpBMAsnpBMA
top.snpBMAlisttop.snpBMAlist
top.snpstop.snps
chr1swallace/snpBMA documentation built on May 13, 2019, 6:19 p.m.