top.snpBMAlist: top.snpBMAlist

Description Usage Arguments Value Author(s)

Description

Show top models in a snpBMAlist object

Usage

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  top.snpBMAlist(object, priors, nmodels = 6L,
    min.pp = NULL, min.cpp = NULL, what = "models", ...)

Arguments

object

Object of class snpBMAlist

priors

vector of priors from which prior odds for models containing a fixed number of SNPs may be derived

nmodels

number of models to show

min.pp

("minimim posterior probability") optional, if present, limit to models with psterior probabilities > min.pp

min.cpp

("minimum cumulative posterior probability") optional, if present, limit to the best models which together account for at least min.cpp of the posterior probability

what

models or snps, indicating whether to output the top models or SNPs

...

additional arguments passed to post.snpBMA

Value

matrix of top models and their Bayes Factors

Author(s)

Chris Wallace


chr1swallace/snpBMA documentation built on May 13, 2019, 6:19 p.m.