Files in cmcouto-silva/gt
Facilities for essential tasks in R
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/admixture.R
R/admixture.plot.R
R/annot_snp_genes.R
R/annotate_fromtbl.R
R/annovar.R
R/clean.R
R/eigensoft2plink.R
R/extensions.R
R/flip_strand.R
R/get.file.path.R
R/get_path.R
R/get_pca_outliers.R
R/get_snp_genes.R
R/ggven_plot.R
R/gml2igraph.R
R/gpath.R
R/haps_extract_ids.R
R/ignore.path.R
R/make_plink_files.R
R/outlier.R
R/parse_ms.R
R/pkg.lib.R
R/plink.R
R/plink.set.case.controls.R
R/plink2.R
R/plink2eigensoft.R
R/plink2vcf.R
R/plink_fst.R
R/plink_get_mind_per_chr.R
R/plink_merge.R
R/plink_merge_list.R
R/plink_pca.R
R/plink_version.R
R/plink_write_idlist.R
R/program_on_path.R
R/read.bim.R
R/read.vcf.R
R/remove_monomorphic_alleles.R
R/reset_fam_state.R
R/see.R
R/separate_genes.R
R/setFID.R
R/shapeit2plink.R
R/shapeit2plink2.R
R/shapeit2vcf.R
R/shapeit2vcf2.R
R/shapeit_merge.R
R/shapeit_set_ancestor.R
R/shapeit_split.R
R/snpdata_mgmt.R
R/subset_vcf.R
R/update_dist_genes.R
R/vcf2plink.R
R/vcf_merge.R
R/write.bim.R
R/write.vcf.R
R/xclip.R
README.md
main.R
man/admixture.Rd
man/admixture.plot.Rd
man/annot_snp_genes.Rd
man/annotate_fromtbl.Rd
man/annovar.Rd
man/clean.Rd
man/eigensoft2plink.Rd
man/flip_strand.Rd
man/get_pca_outliers.Rd
man/get_snp_genes.Rd
man/ggven_plot.Rd
man/outlier.Rd
man/pkg.lib.Rd
man/plink.set.case.controls.Rd
man/plink2eigensoft.Rd
man/plink_fst.Rd
man/plink_merge.Rd
man/plink_merge_list.Rd
man/plink_pca.Rd
man/read.bim.Rd
man/read.vcf.Rd
man/remove_monomorphic_alleles.Rd
man/reset_fam_state.Rd
man/rm.extension.Rd
man/see.Rd
man/separate_genes.Rd
man/setFID.Rd
man/shapeit_merge.Rd
man/shapeit_set_ancestor.Rd
man/shapeit_split.Rd
man/snpdata_mgmt.Rd
man/update_dist_genes.Rd
man/vcf_merge.Rd
man/write.bim.Rd
man/write.vcf.Rd
man/xclip.Rd
