dispersionTable: Retrieve a table of values specifying the mean-variance...
In cole-trapnell-lab/monocle-release: Clustering, differential expression, and trajectory analysis for single- cell RNA-Seq
Description
Usage
Arguments
Value
Description
Calling estimateDispersions computes a smooth function describing how variance
in each gene's expression across cells varies according to the mean. This
function only works for CellDataSet objects containing count-based expression
data, either transcripts or reads.
Usage
1
dispersionTable(cds)
Arguments
cds
The CellDataSet from which to extract a dispersion table.
Value
A data frame containing the empirical mean expression,
empirical dispersion, and the value estimated by the dispersion model.
cole-trapnell-lab/monocle-release documentation built on May 13, 2019, 8:50 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
Calling estimateDispersions computes a smooth function describing how variance in each gene's expression across cells varies according to the mean. This function only works for CellDataSet objects containing count-based expression data, either transcripts or reads.
Usage
1 | dispersionTable(cds)
|
Arguments
cds |
The CellDataSet from which to extract a dispersion table. |
Value
A data frame containing the empirical mean expression, empirical dispersion, and the value estimated by the dispersion model.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.