dot-expand_sce_rows: Helper function to expand a SingleCellExperiment to include...
In combiz/scFlow: A Single-Cell/Nuclei Analysis Toolkit
.expand_sce_rows R Documentation
Helper function to expand a SingleCellExperiment to include specified genes
Description
The function identifies the missing ensembl_gene_id's (if any), and
generates new zero'd matrix rows, rbinds them to the matrix, then sorts
the matrix by ensembl_gene_id. rowData (except ensembl_gene_id) and metadata
are dropped to facilitate subsequent cbind-ing of SingleCellExperiments.
Usage
.expand_sce_rows(sce, union_ensembl_gene_id)
Arguments
sce
a SingleCellExperiment
union_ensembl_gene_id
the full list of ensembl_gene_id to be included
in the new expanded SingleCellExperiment
Value
sce a annotated SingleCellExperiment object with any
combiz/scFlow documentation built on Feb. 25, 2024, 10:25 a.m.
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| .expand_sce_rows | R Documentation |
Helper function to expand a SingleCellExperiment to include specified genes
Description
The function identifies the missing ensembl_gene_id's (if any), and generates new zero'd matrix rows, rbinds them to the matrix, then sorts the matrix by ensembl_gene_id. rowData (except ensembl_gene_id) and metadata are dropped to facilitate subsequent cbind-ing of SingleCellExperiments.
Usage
.expand_sce_rows(sce, union_ensembl_gene_id)
Arguments
sce |
a SingleCellExperiment |
union_ensembl_gene_id |
the full list of ensembl_gene_id to be included in the new expanded SingleCellExperiment |
Value
sce a annotated SingleCellExperiment object with any
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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