dot-preprocess_sce_for_de: Preprocess the SCE for DE analysis
In combiz/scFlow: A Single-Cell/Nuclei Analysis Toolkit
.preprocess_sce_for_de R Documentation
Preprocess the SCE for DE analysis
Description
Subset genes, set factor reference level, and optionally pseudobulk
Usage
.preprocess_sce_for_de(...)
Arguments
...
Value
sce a SingleCellExperiment object
See Also
Other differential gene expression:
.filter_sce_genes_for_de(),
.generate_model_from_vars(),
.perform_de_with_mast(),
perform_de(),
pseudobulk_sce(),
report_de(),
volcano_plot()
combiz/scFlow documentation built on Feb. 25, 2024, 10:25 a.m.
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| .preprocess_sce_for_de | R Documentation |
Preprocess the SCE for DE analysis
Description
Subset genes, set factor reference level, and optionally pseudobulk
Usage
.preprocess_sce_for_de(...)
Arguments
... |
Value
sce a SingleCellExperiment object
See Also
Other differential gene expression:
.filter_sce_genes_for_de(),
.generate_model_from_vars(),
.perform_de_with_mast(),
perform_de(),
pseudobulk_sce(),
report_de(),
volcano_plot()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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