dot-generate_merge_summary_plot: helper fn to generate a merge summary plot for a...

.generate_merge_summary_plotR Documentation

helper fn to generate a merge summary plot for a SingleCellExperiment

Description

if plot_var is a factor, a bar plot is returned. if plot_var is.numeric, a violin plot is returned.

Usage

.generate_merge_summary_plot(
  sce,
  plot_var,
  unique_id_var,
  facet_var = NULL,
  plot_points = FALSE
)

Arguments

sce

a singlecellexperiment object

plot_var

the colData variable with values to plot

unique_id_var

the colData variable identifying unique samples

facet_var

the colData variable to facet/subset by

plot_points

if TRUE plot individual values for violin plots


combiz/scFlow documentation built on Feb. 25, 2024, 10:25 a.m.