exportBedGraph: Generates a bedgraph from GRanges object in order to upload...
In daewoooo/StrandPhaseR: Phase template strands from Strand-seq data
exportBedGraph R Documentation
Generates a bedgraph from GRanges object in order to upload on to UCSC Genome browser
Description
Generates a bedgraph from GRanges object in order to upload on to UCSC Genome browser
Usage
exportBedGraph(index, outputfolder, fragments = NULL, col = "200,100,10")
Arguments
index
is used to index the bedfile(s)
outputfolder
Location to store created bedfile(s)
fragments
A GRanges object with strand and mapq metadata, such as that generated by bam2GRanges
Author(s)
David Porubsky
daewoooo/StrandPhaseR documentation built on April 7, 2024, 7:13 p.m.
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| exportBedGraph | R Documentation |
Generates a bedgraph from GRanges object in order to upload on to UCSC Genome browser
Description
Generates a bedgraph from GRanges object in order to upload on to UCSC Genome browser
Usage
exportBedGraph(index, outputfolder, fragments = NULL, col = "200,100,10")
Arguments
index |
is used to index the bedfile(s) |
outputfolder |
Location to store created bedfile(s) |
fragments |
A |
Author(s)
David Porubsky
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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