plotHaploSegs: Plot inherited haplotype segments as ideogram.
In daewoooo/StrandPhaseR: Phase template strands from Strand-seq data
plotHaploSegs R Documentation
Plot inherited haplotype segments as ideogram.
Description
This function takes as na input a GRanges-class object with genomic positions of each
inherited haplotype block and project them as whole-genome ideogram.
Usage
plotHaploSegs(hapSegm.gr = NULL, layout = "vertical")
Arguments
hapSegm.gr
A GRanges-class object with regions of each inherited haplotype block
layout
Set to 'vertical' or 'horizonal' based on desired layout of an resultant ideogram.
Value
A ggplot object.
Author(s)
David Porubsky
daewoooo/StrandPhaseR documentation built on April 7, 2024, 7:13 p.m.
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| plotHaploSegs | R Documentation |
Plot inherited haplotype segments as ideogram.
Description
This function takes as na input a GRanges-class object with genomic positions of each
inherited haplotype block and project them as whole-genome ideogram.
Usage
plotHaploSegs(hapSegm.gr = NULL, layout = "vertical")
Arguments
hapSegm.gr |
A |
layout |
Set to 'vertical' or 'horizonal' based on desired layout of an resultant ideogram. |
Value
A ggplot object.
Author(s)
David Porubsky
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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