vcf2ranges: Read VCF file into a 'GRanges' object

View source: R/vcf2ranges.R

vcf2rangesR Documentation

Read VCF file into a GRanges object

Description

Read VCF file into a GRanges object

Usage

vcf2ranges(vcfFile = NULL, genotypeField = 1, chromosome = NULL)

Arguments

vcfFile

VCF file containing phased alleles

genotypeField

In case of multiple samples phased in a single file (Default: 1)

chromosome

If only a subset of the chromosomes should be processed, specify them here.

Author(s)

David Porubsky


daewoooo/StrandPhaseR documentation built on April 7, 2024, 7:13 p.m.