exportConsensus: This funcion will load sorted watson and crick matrices and...

In daewoooo/StrandPhaseR: Phase template strands from Strand-seq data

This funcion will load sorted watson and crick matrices and will collapsed them in order to obtain consensus string of each matrix

Description

This funcion will load sorted watson and crick matrices and will collapsed them in order to obtain consensus string of each matrix

Usage

exportConsensus(data.bases, data.quals, min.cov = 2, translateBases = FALSE)

Arguments

min.cov	dtermines minimal number of cells covering each position to consider in consensus
translateBases	translates integer coded bases (1,2,3,4) into letters (A,C,G,T)
data.object	containing sorted watson and crick haplotypes of each single cell

Author(s)

David Porubsky

daewoooo/StrandPhaseR documentation built on April 7, 2024, 7:13 p.m.