Methods to infer clonal structure for a population of cells using single-cell RNA-seq data (and possibly other data modalities). Methods to assign cells to inferred clones and explore differences in gene expression between clones.
Package details |
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Bioconductor views | GeneExpression RNASeq Sequencing SingleCell Software Transcriptomics Visualization |
Maintainer | Davis McCarthy <dmccarthy@svi.edu.au> |
License | GPL (>= 3) |
Version | 0.6.5 |
URL | https://github.com/single-cell-genetics/cardelino |
Package repository | View on GitHub |
Installation |
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