davismcc/cardelino: Clone and Donor Identification from Single Cell Data

Methods to infer clonal structure for a population of cells using single-cell RNA-seq data (and possibly other data modalities). Methods to assign cells to inferred clones and explore differences in gene expression between clones.

README.md

Vignettes Man pages API and functions Files

Package details
Bioconductor views	GeneExpression RNASeq Sequencing SingleCell Software Transcriptomics Visualization
Maintainer	Davis McCarthy <[email protected]>
License	GPL (>= 3)
Version	0.2.2
URL	https://github.com/PMBio/cardelino
Package repository	View on GitHub
Installation	Install the latest version of this package by entering the following in R: `install.packages("devtools") library(devtools) install_github("davismcc/cardelino")`