API for davismcc/cardelino
Clone and Donor Identification from Single Cell Data

Global functions
A_clone Man page
A_germline Man page
Clone ID Man page
Config_all Man page
D_clone Man page
D_germline Man page
D_input Man page
GT_to_prob Man page Source code
Geweke_Z Man page Source code
assign_cells_to_clones Man page Source code
assign_scores Man page Source code
binaryPRC Man page Source code
cardelino Man page
cardelino-package Man page
cell_assign_EM Man page Source code
cell_assign_Gibbs Man page Source code
clone_id Man page Source code
colMatch Man page Source code
donor_id Man page Source code
donor_read_simulator Man page Source code
get_ID_prob Man page Source code
get_doublet_GT Man page Source code
get_doublet_theta Man page Source code
get_snp_matrices Man page Source code
heat_matrix Man page Source code
heatmap.theme Man page Source code
load_GT_vcf Man page Source code
load_cellSNP_vcf Man page Source code
mtx_to_df Man page Source code
multiPRC Man page Source code
nega_beta_entropy Man page Source code
plot_tree Man page Source code
prob_heatmap Man page Source code
pub.theme Man page Source code
read_vcf Man page Source code
rowArgmax Man page
rowMax Man page
sample_seq_depth Man page Source code
sample_tree_SNV Man page Source code
sim_read_count Man page Source code
transpose_GT_prob Man page Source code
tree Man page
tree_3clone Man page
tree_4clone Man page
tree_5clone Man page
vc_heatmap Man page Source code
vireo Man page Source code
vireo_core Man page Source code
vireo_flock Man page Source code
davismcc/cardelino documentation built on Jan. 22, 2019, 2:20 p.m.