run_cdhit: Run CDhit on a list of protein sequences
In djw533/micro.gen.extra: Microbial genomics extensions and functions
run_cdhit R Documentation
Run CDhit on a list of protein sequences
Description
Run CDhit on a list of protein sequences, then read in the output into an R dataframe
Usage
run_cdhit(protein_sequences)
Arguments
protein_sequences
Named vector. List comprised of protein sequences, names are the unique identifiers for the sequences.
Value
R dataframe of CDhit output
Examples
run_cdhit(list_of_protein_sequences)
djw533/micro.gen.extra documentation built on Nov. 8, 2024, 5:11 a.m.
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| run_cdhit | R Documentation |
Run CDhit on a list of protein sequences
Description
Run CDhit on a list of protein sequences, then read in the output into an R dataframe
Usage
run_cdhit(protein_sequences)
Arguments
protein_sequences |
Named vector. List comprised of protein sequences, names are the unique identifiers for the sequences. |
Value
R dataframe of CDhit output
Examples
run_cdhit(list_of_protein_sequences)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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