snippycore_to_df: Read in snippy-core alignment into tidy dataframe for...
In djw533/micro.gen.extra: Microbial genomics extensions and functions
View source: R/sequence_parsing.R
snippycore_to_df R Documentation
Read in snippy-core alignment into tidy dataframe for plotting against a tree
Description
Read in snippy-core alignment (using seqinr::read.fasta) and output a tidy into a tidy dataframe
Usage
snippycore_to_df(input_file)
Arguments
fasta_file
Input fasta file
Value
Tidy data frame
Examples
snippycore_to_df("path/to/file.fasta")
djw533/micro.gen.extra documentation built on Nov. 8, 2024, 5:11 a.m.
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View source: R/sequence_parsing.R
| snippycore_to_df | R Documentation |
Read in snippy-core alignment into tidy dataframe for plotting against a tree
Description
Read in snippy-core alignment (using seqinr::read.fasta) and output a tidy into a tidy dataframe
Usage
snippycore_to_df(input_file)
Arguments
fasta_file |
Input fasta file |
Value
Tidy data frame
Examples
snippycore_to_df("path/to/file.fasta")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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