hominids: A BPP A00 MCMC sample for an hominid phylogeny
In dosreislab/mcmc3r: Tools to work with MCMCtree
hominids R Documentation
A BPP A00 MCMC sample for an hominid phylogeny
Description
This dataset contains the results from the BPP A00 analysis of
hominid evolution from Angelis and dos Reis (2015).
Usage
hominids
Format
hominids is a list with elements mcmc, a dataframe with
20,000 rows and 8 columns, and tree, an object of class
phylo from the ape package.
mcmc is a posterior sample from a BPP A00 MCMC analysis containing
the relative divergence times (tau's) and nucleotide diversities (theta's)
for the four species ape (hominid) phylogeny.
tree contains the phylogeny with node ages given as the posterior
means of the tau's in mcmc.
Source
K. Angelis and M. dos Reis (2015) The impact of ancestral
population size and incomplete lineage sorting on Bayesian estimation of
species divergence times. Curr. Zool., 61: 874–885.
See Also
microcebus
dosreislab/mcmc3r documentation built on March 29, 2024, 6:45 p.m.
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| hominids | R Documentation |
A BPP A00 MCMC sample for an hominid phylogeny
Description
This dataset contains the results from the BPP A00 analysis of hominid evolution from Angelis and dos Reis (2015).
Usage
hominids
Format
hominids is a list with elements mcmc, a dataframe with
20,000 rows and 8 columns, and tree, an object of class
phylo from the ape package.
mcmc is a posterior sample from a BPP A00 MCMC analysis containing
the relative divergence times (tau's) and nucleotide diversities (theta's)
for the four species ape (hominid) phylogeny.
tree contains the phylogeny with node ages given as the posterior
means of the tau's in mcmc.
Source
K. Angelis and M. dos Reis (2015) The impact of ancestral population size and incomplete lineage sorting on Bayesian estimation of species divergence times. Curr. Zool., 61: 874–885.
See Also
microcebus
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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