Description Usage Arguments Details Author(s) References See Also

Prepare mcmctree or bpp control files for marginal likelihood calculation

1 | ```
make.bfctlf(beta, ctlf = "mcmctree.ctl", betaf = "beta.txt")
``` |

`beta` |
numeric vector of beta values |

`ctlf` |
character, mcmctree control file template |

`betaf` |
character, file onto which to write selected beta values |

This function generates a set of `n`

directories each
containing a modified `ctlf`

control file with the appropriate beta
value to run mcmctree (or bpp) to obtain MCMC samples under the required
power-posterior distribution. For the general theory of marginal likelihood
calculation with power posteriors see Yang (2014).

The beta values are printed to `betaf`

.

Mario dos Reis

Yang Z (2014) *Molecular Evolution: A Statistical Approach*. Oxford
University Press. Pages 256–260.

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