Files in eclarke/SarcoidMicrobiome
Figures for the Clarke et al sarcoid microbiome paper
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
R/barcharts.R
R/enrichment.R
R/load_data.R
R/metadata.R
R/opts.R
R/pcoa.R
R/sarcoid_manuscript.R
README.md
SarcoidMicrobiome.Rproj
inst/generate_figures.Rmd
man/ExtractSignificantResults.Rd
man/LinkMatchedControls.Rd
man/LoadData.Rd
man/MakeBarchartData.Rd
man/MakeHeatmapData.Rd
man/MakePCOAData.Rd
man/MakeTopBarchartData.Rd
man/MakeUnifracData.Rd
man/PCoAChunk.Rd
man/PlotBarchart.Rd
man/PlotHeatmap.Rd
man/PlotPCOA.Rd
man/PlotTopBarcharts.Rd
man/RunDESeq2.Rd
man/RunGLMM.Rd
man/StandardizeMetadata.Rd
man/TestMatchedControlMixedModel.Rd
man/TestPermanova.Rd
man/cairo_failsafe.Rd
man/counts_matrix.Rd
man/fct_anon_deterministic.Rd
man/load_data.Rd
man/min_rank.Rd
man/root_tree.Rd
