PlotBarchart: Plots the results of MakeBarchartData as a set of grouped...

In eclarke/SarcoidMicrobiome: Figures for the Clarke et al sarcoid microbiome paper

Description

Plots the results of MakeBarchartData as a set of grouped barcharts.

Usage

PlotBarchart(.data, x.col = "SampleType", fill.col = "taxa",
  grouping.col = "SubjectID", x.labs = attributes(.data)$labels,
  fill.values = attributes(.data)$fill,
  fill.breaks = rev(levels(.data$taxa)), theme = opts$barchart.theme,
  guide = opts$barchart.guide)

Arguments

.data	result from MakeBarchartData
x.col	the mapping for the x-axis
fill.col	the mapping for the fill aesthetic
grouping.col	the grouping columns specified in MakeBarchartData, if any
x.labs	if desired, what to revalue the x-axis labels to
fill.values	named vector for fill colors
fill.breaks	ordering of the fills (currently a noop)
theme	a theme object to add

Value

a ggplot2::ggplot object

eclarke/SarcoidMicrobiome documentation built on May 15, 2019, 7:53 p.m.