eclarke/SarcoidMicrobiome
Figures for the Clarke et al sarcoid microbiome paper

Package index
Search the eclarke/SarcoidMicrobiome package
Vignettes
Functions
24
Source code
6
Man pages
24
Home
/
GitHub
/
eclarke/SarcoidMicrobiome
/
PCoAChunk: Wrapper for UniFrac calculations, PERMANOVA testing and PCoA...

PCoAChunk: Wrapper for UniFrac calculations, PERMANOVA testing and PCoA...
In eclarke/SarcoidMicrobiome: Figures for the Clarke et al sarcoid microbiome paper

Description Usage

Description

Wrapper for UniFrac calculations, PERMANOVA testing and PCoA plotting.

Usage

1
2
3
PCoAChunk(agg, s, tree, rarefy.depth, testing.terms, sampleset = c("A", "B",
  "C"), dataset = c("16S", "ITS"), subset, fig.num,
  fig.dir = opts$figure_fp, only.studygroup.terms = TRUE)

eclarke/SarcoidMicrobiome documentation built on May 15, 2019, 7:53 p.m.

Related to PCoAChunk in eclarke/SarcoidMicrobiome...

eclarke/SarcoidMicrobiome index
README.md

R Package Documentation

rdrr.io home R language documentation Run R code online

Browse R Packages

CRAN packages Bioconductor packages R-Forge packages GitHub packages

We want your feedback!

Note that we can't provide technical support on individual packages. You should contact the package authors for that.
GitHub issue tracker
ian@mutexlabs.com
Personal blog

 
Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.

Close