formatted_output_mef_results: Output formatted sequences in foreground that are mapped to...

In ecnuzdd/PhosMap: A Comprehensive R Package For Analyzing Quantitative Phosphoproteomics Data

Output formatted sequences in foreground that are mapped to specific motifs.

Description

Output formatted sequences in foreground that are mapped to specific motifs.

Usage

formatted_output_mef_results(foreground_sequences_mapped_to_motifs)

Arguments

foreground_sequences_mapped_to_motifs

A list that consists of motifs and their corresponding aligned sequences from foreground.

Value

A data frame that motifs and their corresponding aligned sequences from foreground.

Author(s)

Dongdong Zhan and Mengsha Tong

Examples

## Not run: 
ftp_url <- "ftp://111.198.139.72:4000/pub/PhosMap_datasets/function_demo_data/formatted_output_mef_results.RData"
load_data <- load_data_with_ftp(ftp_url, 'RData')
writeBin(load_data, "formatted_output_mef_results.RData")
load("formatted_output_mef_results.RData")

formatted_output_df <- formatted_output_mef_results(
  foreground_sequences_mapped_to_motifs
)
head(formatted_output_df)

## End(Not run)

ecnuzdd/PhosMap documentation built on Dec. 7, 2022, 4:09 a.m.