PlateParser: Function to read in mapping file and tweak format so that it...

In econtijoch/Biomass-Workflow: Microbial Density Data Generation and Analysis Tools

Description

Function to read in mapping file and tweak format so that it is friendly with the rest of the package functinos

Usage

PlateParser(plate_reader_file, shiny = FALSE, type = NULL, size = 96)

Arguments

plate_reader_file	Fluorescence data from the plate reader (can be in .csv or .xls(x) format – if in excel file, only the FIRST sheet within the file will be read)
shiny	OPTIONAL: necessary for running with shiny app interface since filenames are not the same.
type	OPTIONAL: necessary for running with shiny app, must specify file type
size	optional size of plate (96 or 384)

Value

a list containing: 1) a data frame with the data from the plate reader file and 2) the number of measurements taken for each sample

econtijoch/Biomass-Workflow documentation built on May 15, 2019, 7:59 p.m.