FuscaAssay-class: CellRouter assay.

FuscaAssay-classR Documentation

CellRouter assay.

Description

Assay to create CellRouter.

Slots

rawdata

AnyMatrix; raw data, cells should be represented as columns, genes should be represented as rows.

ndata

AnyMatrix; original data, cells should be represented as columns, genes should be represented as rows.

scale.data

AnyMatrix; scaled data.

sampTab

dataframe; data frame; metadata information with cells names as row names, number of genes as nGene, number of UMI as nUMI, and cell names as conditions. It also includes the clusters and subclusters of the data in the assay.

image

list; image information of the ST assay.


edroaldo/fusca documentation built on March 1, 2023, 1:43 p.m.