plotClusterProfiler: Plot pathway enrichment analysis results.

In edroaldo/fusca: Framework for Unified Single-Cell Analysis

Plot pathway enrichment analysis results.

Description

Plot the cluster profiler and save to file.

Usage

plotClusterProfiler(
  table,
  num.pathways = 10,
  number.words = 3,
  order,
  flip = TRUE
)

Arguments

table	compareClusterResult; the compareClusterResult of the compareClusterResult class as obtained from the clusterProfiler::compareCluster constructor.
num.pathways	numeric; the maximum number of pathways considered in the analysis.
number.words	numeric; the minimum number of words for the cluster to be considered.
order	character vector; the ordered names of clusters.
flip	boolean; apply coordinate flip (horizontal and vertical) to the plot.

Value

ggplot2; plot.

edroaldo/fusca documentation built on March 1, 2023, 1:43 p.m.