plotGenesInClusters-methods: Plot top-ranked genes in transcriptional clusters.

In edroaldo/fusca: Framework for Unified Single-Cell Analysis

Plot top-ranked genes in transcriptional clusters.

Description

Plot top-ranked genes calculated by the rankGenesTranscriptionalClusters function and saves to file.

Usage

plotGenesInClusters(assay.type = "RNA", rankedDynamics, traj.name, num.genes)

## S4 method for signature 'list'
plotGenesInClusters(assay.type = "RNA", rankedDynamics, traj.name, num.genes)

Arguments

assay.type	character; the type of data to use.
rankedDynamics	list; ranked dynamics as calculated by the rankGenesTranscriptionalClusters function.
traj.name	character; trajectory of interest.
num.genes	numeric; number of genes to plot.

Value

ggplot2 graph.

edroaldo/fusca documentation built on March 1, 2023, 1:43 p.m.