plotInteractionNetwork: Plot graph of interactions.

In edroaldo/fusca: Framework for Unified Single-Cell Analysis

Plot graph of interactions.

Description

Create a plot from the graph of interactions and save it to file.

Usage

plotInteractionNetwork(matrix, interactionList, interactionTable)

Arguments

matrix	data frame; the interaction matrix as calculated by the interactionmatrix function.
interactionList	character vector; the list of types considered in the interactions.
interactionTable	matrix?; the interactions for each pair, plus the pvalue column, as calculated bu the calculatePvalue function.

Value

list; the igraph interaction network and the plot.

edroaldo/fusca documentation built on March 1, 2023, 1:43 p.m.