plotpaths-methods: Plot information about genes in selected paths.
In edroaldo/fusca: Framework for Unified Single-Cell Analysis
plotpaths R Documentation
Plot information about genes in selected paths.
Description
Plot genes along selected trajectories showing each single-cell in the
trajectory and curve fit, and save to file.
Usage
plotpaths(object, assay.type = "RNA", paths, genelist)
## S4 method for signature 'CellRouter'
plotpaths(object, assay.type = "RNA", paths, genelist)
Arguments
object
CellRouter object.
assay.type
character; the type of data to use.
paths
character vector; selected trajectories.
genelist
character vector; genes to show.
Value
list of ggplot2 graphs.
edroaldo/fusca documentation built on March 1, 2023, 1:43 p.m.
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| plotpaths | R Documentation |
Plot information about genes in selected paths.
Description
Plot genes along selected trajectories showing each single-cell in the trajectory and curve fit, and save to file.
Usage
plotpaths(object, assay.type = "RNA", paths, genelist) ## S4 method for signature 'CellRouter' plotpaths(object, assay.type = "RNA", paths, genelist)
Arguments
object |
CellRouter object. |
assay.type |
character; the type of data to use. |
paths |
character vector; selected trajectories. |
genelist |
character vector; genes to show. |
Value
list of ggplot2 graphs.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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