plottrajectory-methods: Plot genes along a trajectory.

In edroaldo/fusca: Framework for Unified Single-Cell Analysis

Plot genes along a trajectory.

Description

Plot gene expressions along a trajectory, return ggplot and save to file.

Usage

plottrajectory(object, assay.type = "RNA", trajectory, geneList)

## S4 method for signature 'CellRouter'
plottrajectory(object, assay.type = "RNA", trajectory, geneList)

Arguments

object	CellRouter object.
assay.type	character; the type of data to use.
trajectory	character; selected trajectory.
geneList	character vector; gene list.

Value

ggplot; the graph.

edroaldo/fusca documentation built on March 1, 2023, 1:43 p.m.