rankpaths: Rank signaling pathways.

In edroaldo/fusca: Framework for Unified Single-Cell Analysis

Rank signaling pathways.

Description

Rank signaling pathways based on the number of targets, the rank, and the mean flow.

Usage

rankpaths(summary, apathways)

Arguments

summary	data frame; the summary of the files obtained in the findpaths.simple function.
apathways	list; the pathways as calculated by the activeSignaling function.

Value

list; the list of ranked paths for each interaction (npath) and the list with the number of targets in it (n.targets).

edroaldo/fusca documentation built on March 1, 2023, 1:43 p.m.