topGenes-methods: Find genes highly correlated with pseudotime.
In edroaldo/fusca: Framework for Unified Single-Cell Analysis
topGenes R Documentation
Find genes highly correlated with pseudotime.
Description
Find genes highly up-correlated or down-correlated genes in each path
according to the specified quantiles.
Usage
topGenes(object, max.quantile, min.quantile)
## S4 method for signature 'CellRouter'
topGenes(object, max.quantile, min.quantile)
Arguments
object
CellRouter object
max.quantile
numeric; quantile to select positively correlated genes.
min.quantile
numeric; quantile to select negatively correlated genes.
Value
CellRouter object with the top.correlations slot updated.
edroaldo/fusca documentation built on March 1, 2023, 1:43 p.m.
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| topGenes | R Documentation |
Find genes highly correlated with pseudotime.
Description
Find genes highly up-correlated or down-correlated genes in each path according to the specified quantiles.
Usage
topGenes(object, max.quantile, min.quantile) ## S4 method for signature 'CellRouter' topGenes(object, max.quantile, min.quantile)
Arguments
object |
CellRouter object |
max.quantile |
numeric; quantile to select positively correlated genes. |
min.quantile |
numeric; quantile to select negatively correlated genes. |
Value
CellRouter object with the top.correlations slot updated.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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