View source: R/rbd.getBSfromIET.R
This function gets the binding sequences from the input eluate table
1 2 3 4 5 6 7 8 | rbd.getBSfromIET(
filtered_input_eluate_table,
fasta_file,
align_to = "PDB",
protein_to_uniprot_id = NULL,
protein_dict = NULL,
include_ambiguous = FALSE
)
|
filtered_input_eluate_table |
Output from rbd.makeIETable() |
fasta_file |
FASTA file from seqinr::read.fasta() |
align_to |
What source to align the BS to: "PDB","FASTA","UniProt" |
protein_to_uniprot_id |
Table containing protein_id,uniprot_id,pdb_id |
protein_dict |
protein_dict |
include_ambiguous |
include_ambiguous |
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