rbd.getBindingSeq3: RBD: Get Binding Sequence - Casetello et. al 2016 Method
In egmg726/crisscrosslinker: An R package for protein interaction analysis
View source: R/rbd.getBindingSeq3.R
Description
This function gets the binding sequence using a similar method to Castello et. al 2016
Usage
1
rbd.getBindingSeq3(trypticPeptide, enzyme, sourceSequence, cleave_offset = 4)
Arguments
trypticPeptide
trypticPeptide, peptide detected by RBDmap/MS method
enzyme
enzyme used: LysC or ArgC
sourceSequence
sourceSequence, used as the reference to locate the binding sequence
cleave_offset
Cleave offset for the sequence. Defaults to 4
egmg726/crisscrosslinker documentation built on Jan. 23, 2021, 1:50 a.m.
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View source: R/rbd.getBindingSeq3.R
Description
This function gets the binding sequence using a similar method to Castello et. al 2016
Usage
1 | rbd.getBindingSeq3(trypticPeptide, enzyme, sourceSequence, cleave_offset = 4)
|
Arguments
trypticPeptide |
trypticPeptide, peptide detected by RBDmap/MS method |
enzyme |
enzyme used: LysC or ArgC |
sourceSequence |
sourceSequence, used as the reference to locate the binding sequence |
cleave_offset |
Cleave offset for the sequence. Defaults to 4 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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