PlotPeptideCore: PlotPeptideCore
In elmerfer/RAPInetMHCpan: an R API to netMHCpan and netMHCIIpan softwares for neural network prediction of peptide binders
Description
Usage
Arguments
Value
Examples
View source: R/PlotRAPIFunctions.R
Description
generate a ggplot2 logo of the evaluated papetide and its binding regions (Core) allowing
the identification of the Core with its deleted (bulging out) regions and predicted insertion sites
Usage
1
PlotPeptideCore(eDB, index)
Arguments
eDB
a data frame or RAPIMHCI or RAPIMHCII class object
index
(integer) indicating which row of the RAPIMHC and RAPIMHCII objects
Value
a ggplot2 object
Examples
1
2
3
4
## Not run:
PlotPeptideCore(eDB = res, index = 1)
## End(Not run)
elmerfer/RAPInetMHCpan documentation built on Sept. 17, 2021, 2:14 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
View source: R/PlotRAPIFunctions.R
Description
generate a ggplot2 logo of the evaluated papetide and its binding regions (Core) allowing the identification of the Core with its deleted (bulging out) regions and predicted insertion sites
Usage
1 | PlotPeptideCore(eDB, index)
|
Arguments
eDB |
a data frame or RAPIMHCI or RAPIMHCII class object |
index |
(integer) indicating which row of the RAPIMHC and RAPIMHCII objects |
Value
a ggplot2 object
Examples
1 2 3 4 | ## Not run:
PlotPeptideCore(eDB = res, index = 1)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.