VerifySeq: VerifySeq
In elmerfer/RAPInetMHCpan: an R API to netMHCpan and netMHCIIpan softwares for neural network prediction of peptide binders
Description
Usage
Arguments
Value
Examples
View source: R/GeneralRAPIFunctions.R
Description
generate a ggplot2, where in the y axis the amount of alleles bindig to the sequence starting at x position is displayed
Usage
1
VerifySeq(seqFile, eDB)
Arguments
seqFile
fasta file name (default missing, it will open an file open dialog box)
eDB
RAPIMHC or RAPIMHCII object
Value
a list with the slot "Peptide" for RAPIMHC y RAPIMHCII and with "InterCore" in the RAPIMHC case
Examples
1
2
3
4
## Not run:
VerifySeq(eDB = result)
## End(Not run)
elmerfer/RAPInetMHCpan documentation built on Sept. 17, 2021, 2:14 p.m.
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Description Usage Arguments Value Examples
View source: R/GeneralRAPIFunctions.R
Description
generate a ggplot2, where in the y axis the amount of alleles bindig to the sequence starting at x position is displayed
Usage
1 | VerifySeq(seqFile, eDB)
|
Arguments
seqFile |
fasta file name (default missing, it will open an file open dialog box) |
eDB |
RAPIMHC or RAPIMHCII object |
Value
a list with the slot "Peptide" for RAPIMHC y RAPIMHCII and with "InterCore" in the RAPIMHC case
Examples
1 2 3 4 | ## Not run:
VerifySeq(eDB = result)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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