deg_heatmap: Heatmap for significant contrast genes

In espors/idepGolem: Integrated Differential Expression and Pathway Analysis

Heatmap for significant contrast genes

Description

Create a ComplexHeatmap of the processed expression data for the genes that were significantly expressed in the selected comparison. The data for this heatmap comes from the deg_heat_data function.

Usage

deg_heatmap(df, bar, heatmap_color_select, cluster_rows)

Arguments

df	Submatrix of the processed data matrix from the deg_heta_data function
bar	Vector to signify a positive (1) expression fold change or a negative (-1) change
heatmap_color_select	Color vector to use for the heatmap expression scale
cluster_row	Boolean to indicate whether or not to cluster rows (TRUE/FALSE)

Value

A drawn heatmap from the filtered data.

espors/idepGolem documentation built on April 23, 2024, 1:11 p.m.