getEvent: Enumerate AS events This will not merge SE events across...

In fchen365/surf: Statistical Utility for RBP (RNA binding protein) Functions

Description

Enumerate AS events This will not merge SE events across consecutive exon Find AS events from isoform parts list

Usage

getEvent(isoPL, cores = max(1, detectCores() - 2))

Arguments

isoPL	isoform parts list
cores	integer, number of computing cores to use.

Value

a list as input with added two components:

asNum	integer matrix, dim = dim of segment 0 means no event, and other integers indicate event number.
asName	a list of named character vector, with each element corresponding to one isoform. name is event number, character is event name

fchen365/surf documentation built on June 18, 2021, 12:02 p.m.