load_ode: Construct and compile the functions for proposing an ODE...

In fintzij/stemr: Stochastic Epidemic Model Simulation and Estimation

Construct and compile the functions for proposing an ODE path, with integration of the deterministic mean ODEs accomplished using the Boost odeint library.

Description

Construct and compile the functions for proposing an ODE path, with integration of the deterministic mean ODEs accomplished using the Boost odeint library.

Usage

load_ode(ode_rates, compile_ode, messages, atol, rtol, stepper)

Arguments

ode_rates	list containing the ODE rate functions, derivatives, and parameter codes
compile_ode	if TRUE, code will be generated and compiled. If a character string for the name of a file that does not yet exist, code will be generated but not compiled. If the name of a file that exists in the current working directory, the code in the file will be compiled.
messages	should messages be printed

Value

list containing the ODE pointers and calling code

fintzij/stemr documentation built on March 25, 2022, 12:25 p.m.