API for fmichonneau/phyloch
Tools for phylogenetics and taxonomy
| Global functions | |
|---|---|
| BOTHlabels2 | Man page |
| HPDbars | Man page |
| add.geoscale | Man page |
| add.scale.bar2 | Man page |
| add.timeframe | Man page |
| add.trendline | Man page |
| aliscore | Man page |
| append2tips | Man page |
| axisChrono | Man page |
| axisGeo | Man page |
| bigtree | Man page |
| bowed | Man page |
| box.clades | Man page |
| box.tips | Man page |
| broken.segments | Man page |
| c.alignment | Man page |
| c.binary | Man page |
| c.genes | Man page |
| clade.bars | Man page |
| code.simple.gaps | Man page |
| compare.phylo | Man page |
| continousML | Man page |
| degap | Man page |
| delete.empty.cells | Man page |
| delete.gaps | Man page |
| delete.nonoverlapping.seq | Man page |
| descendants | Man page |
| divide.angle | Man page |
| drop.tip2 | Man page |
| edge.color | Man page |
| extract.clade2 | Man page |
| extractBEASTstats | Man page |
| extractMRBAYESstats | Man page |
| extractSTARBEASTstats | Man page |
| fillEndsWithN | Man page |
| fixNodes | Man page |
| gblocks | Man page |
| geophylo | Man page |
| geophylo2 | Man page |
| gradstein04 | Man page |
| homogen.base.freq | Man page |
| hordeum | Man page |
| ident.seq | Man page |
| identicalTips | Man page |
| is.consecutive | Man page |
| ladderize2 | Man page |
| locpie | Man page |
| mafft | Man page |
| mafft.6.24 | Man page |
| match.nodelabels | Man page |
| mixed.fonts.text | Man page |
| mrbayes | Man page |
| mrbayes.mixed | Man page |
| mrp | Man page |
| multistate | Man page |
| multistateMCMC | Man page |
| multistateML | Man page |
| node.support | Man page |
| node.trans | Man page |
| nodeInfo | Man page |
| noi | Man page |
| origin | Man page |
| pal | Man page |
| phyloch | Man page |
| phyloch-package | Man page |
| pie.at.tip | Man page |
| piecoltips | Man page |
| pis | Man page |
| plot.phylo.upon | Man page |
| plotNetwork | Man page |
| prank | Man page |
| raxml | Man page |
| rbeauti | Man page |
| read.beast | Man page |
| read.beast.table | Man page |
| read.fas | Man page |
| read.mrbayes | Man page |
| read.nex | Man page |
| read.phy | Man page |
| read.starbeast | Man page |
| read.xml | Man page |
| rotate2 | Man page |
| saturation.plot | Man page |
| shiftNodeAge | Man page |
| sister | Man page |
| strat2012 | Man page |
| strheight90 | Man page |
| string.dim | Man page |
| strwidth90 | Man page |
| taxo.fonts | Man page |
| tip.color | Man page |
| tiplabels2 | Man page |
| treeannotator | Man page |
| unresolve.clade | Man page |
| vipera | Man page |
| vipera.bayes | Man page |
| vipera.ml | Man page |
| viperidae | Man page |
| write.fas | Man page |
| write.nex | Man page |
| write.partitioned.nex | Man page |
| write.phy | Man page |
| write.sequin | Man page |
