computeCC: computeCC
In fungenomics/cytobox: A toolbox for analyzing single cell RNA-seq data
Description
Usage
Arguments
Value
Author(s)
Description
Compute the cell cycle scores for a Seurat object, consisting of the mean expression,
in every cell, of a set of G1/S and G2/M phase markers.
Usage
1
computeCC(seurat, species = "mm")
Arguments
seurat
Seurat object
species
"mm" or "hg"
Value
A seurat object with scores in the @meta.data slot in two
new columns, "G1_S_score" and "G2_M_score"
Author(s)
Selin Jessa
fungenomics/cytobox documentation built on Feb. 13, 2020, 10:51 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Author(s)
Description
Compute the cell cycle scores for a Seurat object, consisting of the mean expression, in every cell, of a set of G1/S and G2/M phase markers.
Usage
1 | computeCC(seurat, species = "mm")
|
Arguments
seurat |
Seurat object |
species |
"mm" or "hg" |
Value
A seurat object with scores in the @meta.data slot in two
new columns, "G1_S_score" and "G2_M_score"
Author(s)
Selin Jessa
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.