symbols2ensembl: Convert gene symbols to ENSEMBL gene IDs

In fungenomics/cytobox: A toolbox for analyzing single cell RNA-seq data

Description

Convert gene symbols to ENSEMBL gene IDs

Usage

symbols2ensembl(x, sp = "hg")

Arguments

x	Character vector of genes, or matrix (e.g. of counts) where rownames are genes.
sp	Character, one of "mm" or "hg", specifying the species for which data is given in mat. Default: "hg".

Author(s)

Selin Jessa

Examples

mat1 <- matrix(seq(1, 15), nrow = 3)
rownames(mat1) <- c("Gfap", "Fabp7", "Foo")
symbols2ensembl(mat1)

symbols2ensembl(c("Gfap", "Fabp7"), "mm")

fungenomics/cytobox documentation built on Feb. 13, 2020, 10:51 a.m.