whichCells: Retrieve cells in specified clusters
In fungenomics/cytobox: A toolbox for analyzing single cell RNA-seq data
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Given a Seurat object and the names of specific clusters (corresponding
to identities in seurat@ident), return the names of cells
in those clusters.
Usage
1
whichCells(seurat, clusters)
Arguments
seurat
Seurat object
clusters
Vector specifying clusters for which cells should be retrieved.
Elements should correspond to levels in seurat@ident.
Value
Character vector of cell names
Author(s)
Selin Jessa
Examples
1
whichCells(pbmc, clusters = c(0, 1))
fungenomics/cytobox documentation built on Feb. 13, 2020, 10:51 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
Given a Seurat object and the names of specific clusters (corresponding
to identities in seurat@ident), return the names of cells
in those clusters.
Usage
1 | whichCells(seurat, clusters)
|
Arguments
seurat |
Seurat object |
clusters |
Vector specifying clusters for which cells should be retrieved.
Elements should correspond to levels in |
Value
Character vector of cell names
Author(s)
Selin Jessa
Examples
1 | whichCells(pbmc, clusters = c(0, 1))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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