percentilesMarkerExpression: perecentilesMarkerExpression
In fungenomics/cytobox: A toolbox for analyzing single cell RNA-seq data
Description
Usage
Arguments
Value
Author(s)
Description
perecentilesMarkerExpression
Usage
1
percentilesMarkerExpression(seurat, genes)
Arguments
seurat
Seurat object
genes
String or character vector specifying gene(s) to use
Value
Data frame with three columns: "Cell" which specifies the cell ID
obtained from colnames(seurat@data), "Percentile" giving the
percentile expression for each cell, and
"Gradient_group" which gives the ordering that should be used to assign
colours by gradient.
Author(s)
adapted from code from Alexis Blanchet-Cohen
fungenomics/cytobox documentation built on Feb. 13, 2020, 10:51 a.m.
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Description Usage Arguments Value Author(s)
Description
perecentilesMarkerExpression
Usage
1 | percentilesMarkerExpression(seurat, genes)
|
Arguments
seurat |
Seurat object |
genes |
String or character vector specifying gene(s) to use |
Value
Data frame with three columns: "Cell" which specifies the cell ID
obtained from colnames(seurat@data), "Percentile" giving the
percentile expression for each cell, and
"Gradient_group" which gives the ordering that should be used to assign
colours by gradient.
Author(s)
adapted from code from Alexis Blanchet-Cohen
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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