mm2hg: mm2hg

In fungenomics/cytobox: A toolbox for analyzing single cell RNA-seq data

Description

Convert genes from mouse to human, wrapper around convertGenesBetweenSpeciesHomologs. For vectors, the output is not order preserving. For matrices, order is preserved, but genes where the homolog is not found are silently dropped.

Usage

mm2hg(x, ...)

Arguments

x	Character vector or matrix with mouse gene symbols to convert. If character, provide either individual strings or one character vector. If a matrix, rownames should be gene symbols.

Author(s)

Selin Jessa, adapted from Claudia Kleinman

Examples

mm2hg("Tubb5", "Nes")
mm2hg(c("Tubb5", "Nes"))

mat1 <- matrix(seq(1, 15), nrow = 3)
rownames(mat1) <- c("Gfap", "Fabp7", "Foo")
mm2hg(mat1)

fungenomics/cytobox documentation built on Feb. 13, 2020, 10:51 a.m.