breedTools: Estimate breed composition of unknown animals using...
In funkhou9/breedTools: Tools for use in breed composition prediction using genomic data
Description
The breedTools package contains functions used to determine the breed/ancestry composition
for test animals from their genotyping data alone. It does so using genotyping data from
a set of reference populations. The methods contained in this package were used to generate
the manuscript by Funkhouser et al. in the inaugural issue of Translational Animal Science (TAS)
from January 2016.
There are a few ways in which breedTools can infer breed composition. These are:
Predict overall breed/ancestry proportions genome wide.
Estimate breed posterior probabilities based on looking at
phased, limited regions of the genome.
funkhou9/breedTools documentation built on May 16, 2019, 4:04 p.m.
R Package Documentation
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Description
The breedTools package contains functions used to determine the breed/ancestry composition
for test animals from their genotyping data alone. It does so using genotyping data from
a set of reference populations. The methods contained in this package were used to generate
the manuscript by Funkhouser et al. in the inaugural issue of Translational Animal Science (TAS)
from January 2016.
There are a few ways in which breedTools can infer breed composition. These are:
Predict overall breed/ancestry proportions genome wide.
Estimate breed posterior probabilities based on looking at phased, limited regions of the genome.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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