has_progeny: Detect if each ID has progeny in pedigree and how many.
In funkhou9/breedTools: Tools for use in breed composition prediction using genomic data
Description
Usage
Arguments
Value
Description
Genotyping data can also be provided to know whether
an available sire has genotyping data available
Usage
1
has_progeny(id, ped, geno = NULL)
Arguments
id
character naming ID of interest
ped
data.frame consisting of pedigree information
with columns ID, Sire, Dam in that order
geno
matrix of SNP array data
Value
integer indicating how many progeny the id of interest
has, either in the provided pedigree or in the pedgree with
genotyping data. If none found, returns NA.
funkhou9/breedTools documentation built on May 16, 2019, 4:04 p.m.
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Description Usage Arguments Value
Description
Genotyping data can also be provided to know whether an available sire has genotyping data available
Usage
1 | has_progeny(id, ped, geno = NULL)
|
Arguments
id |
character naming ID of interest |
ped |
data.frame consisting of pedigree information with columns ID, Sire, Dam in that order |
geno |
matrix of SNP array data |
Value
integer indicating how many progeny the id of interest has, either in the provided pedigree or in the pedgree with genotyping data. If none found, returns NA.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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