Files in funkhou9/breedTools
Tools for use in breed composition prediction using genomic data

.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/QP_SimCross.R R/QPseparate.R R/QPsolve.R R/QPsolve_par.R R/allele_freq.R R/breedTools.R R/breed_lookup.R R/build_KBP.R R/build_MBP.R R/build_local_reference.R R/dist_plot.R R/get_gsibs.R R/get_sibs.R R/haplo_comp.R R/has_gsib.R R/has_progeny.R R/has_sib.R R/has_sire.R R/mat_allele.R R/ped_build.R R/pick_unrelated.R R/screen_purity.R R/sim_composition.R R/sim_plot.R R/solve_KBP.R R/solve_MBP.R R/solve_bp_generic.R R/solve_composition.R R/utils.R README.md
breedTools.Rproj
data-raw/LowD_chip_maps.RData
data-raw/additional_ref_geno.RData
data-raw/reference_assemble.R
data-raw/trio_IDs.RData
data-raw/trio_gpData_fix.RData
data-raw/trio_ped_fimpute.txt
data/GWBC_ref_A.RData
data/GWBC_ref_B.RData
data/GWBC_ref_C.RData
data/KBP_ref_A.RData
data/KBP_ref_B.RData
data/KBP_ref_C.RData
data/KHAP_A.RData
data/KHAP_B.RData
data/KHAP_C.RData
data/MBP_ref_A.RData
data/MBP_ref_B.RData
data/MBP_ref_C.RData
data/MHAP_A.RData
data/MHAP_B.RData
data/MHAP_C.RData
man/allele_freq.Rd man/breedTools.Rd man/breed_lookup.Rd man/build_KBP.Rd man/build_MBP.Rd man/build_local_reference.Rd man/dist_plot.Rd man/get_gsibs.Rd man/get_sibs.Rd man/haplo_comp.Rd man/has_gsib.Rd man/has_progeny.Rd man/has_sib.Rd man/has_sire.Rd man/ped_build.Rd man/pick_unrelated.Rd man/screen_purity.Rd man/sim_composition.Rd man/sim_plot.Rd man/solve_KBP.Rd man/solve_MBP.Rd man/solve_bp_generic.Rd man/solve_composition.Rd tests/testthat.R
tests/testthat/dat_for_allele_freqs.RData
tests/testthat/sample_genotypes.RData
tests/testthat/test_sim_composition.R tests/testthat/test_solve_composition.R
funkhou9/breedTools documentation built on May 14, 2017, 4:35 a.m.