wikipwsHS_Symbol_pathwayCollection: Wikipathways Homosapiens Gene Symbols
In gabrielodom/pathwayPCA: Integrative Pathway Analysis with Modern PCA Methodology and Gene Selection
wikipwsHS_Symbol_pathwayCollection R Documentation
Wikipathways Homosapiens Gene Symbols
Description
A pathwayCollection object containing the homosapiens
pathways list from Wikipathways (https://www.wikipathways.org/).
Usage
data(wikipwsHS_Symbol_pathwayCollection)
Format
A pathwayCollection list of three elements:
pathways : A named list of 457 character vectors. Each
vector contains the Gene Symbols of the individual genes within that
pathway as a vector of character strings. The names are the shorthand
pathway names.
TERMS : A character vector of length 457 containing the
shorthand names of the gene pathways.
description : A character vector of length 457 containing
the full names of the gene pathways.
Details
This pathwayCollection was sent to us from Dr. Alexander Pico
at the Gladstone Institute
(https://gladstone.org/our-science/people/alexander-pico).
This pathway collection was translated from EntrezIDs to HGNC Symbols with
the script convert_EntrezID_to_HGNC_Ensembl.R in scripts.
Source
Dr. Alexander Pico, Wikipathways
gabrielodom/pathwayPCA documentation built on July 10, 2023, 3:32 a.m.
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| wikipwsHS_Symbol_pathwayCollection | R Documentation |
Wikipathways Homosapiens Gene Symbols
Description
A pathwayCollection object containing the homosapiens
pathways list from Wikipathways (https://www.wikipathways.org/).
Usage
data(wikipwsHS_Symbol_pathwayCollection)
Format
A pathwayCollection list of three elements:
pathways: A named list of 457 character vectors. Each vector contains the Gene Symbols of the individual genes within that pathway as a vector of character strings. The names are the shorthand pathway names.TERMS: A character vector of length 457 containing the shorthand names of the gene pathways.description: A character vector of length 457 containing the full names of the gene pathways.
Details
This pathwayCollection was sent to us from Dr. Alexander Pico
at the Gladstone Institute
(https://gladstone.org/our-science/people/alexander-pico).
This pathway collection was translated from EntrezIDs to HGNC Symbols with
the script convert_EntrezID_to_HGNC_Ensembl.R in scripts.
Source
Dr. Alexander Pico, Wikipathways
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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